SRR1526070_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526070_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	110213
Sequences flagged as poor quality	0
Sequence length	56
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGGATGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	1662	1.5079890756988739	No Hit
TGGATGGGGTCACAGATCCTCTTCTGAGATGAGTTTTTGTTCAATCCGCCCAATCT	514	0.4663696660103618	No Hit
TGGATGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	386	0.35023091649805377	No Hit
TGGATGGGGTCACAGATCCTCTTCTGAAGGAGATTGGGCGGATTGAACAAAAACTC	380	0.3447869126146643	No Hit
TGGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	273	0.24770217669421937	No Hit
TGGATGGGGGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCGTGCATTTATCAGAT	245	0.222296825238402	No Hit
TGGATGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	205	0.18600346601580575	No Hit
TGGATGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCCAAGATTAAG	189	0.17148612232676727	No Hit
TGGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	167	0.15152477475433931	No Hit
TGGATGGGGAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCGCTGACCCC	152	0.13791476504586572	No Hit
TGGATGGGGCTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGAC	136	0.12339742135682723	No Hit
TGGATGGGGGGTTCCTTTGGTCGCTCGCTCCTCTCCTACTTGGATAACTGTGGTAA	135	0.12249008737626234	No Hit
TGGATGGGGTCACAGATCCTCTTCTGAAGGAGATTGGGCGCATTGAACAAAAACTC	127	0.11523141553174308	No Hit
TGGATGGGGGGTGAGCTCCCTCCCGGCTCCGGCCGGGGGTCGGGCGCCGGCGGCTT	121	0.10978741164835364	No Hit
TGGATGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCCACGATTAAG	115	0.10434340776496422	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CATTATA	15	0.008071681	50.523018	41
CGCATTG	20	3.9946323E-4	50.43015	39
GCGCATT	20	3.9946323E-4	50.43015	38
ATATCAT	20	4.0037066E-4	50.406982	37
ACGCTTA	15	0.0081454255	50.406982	37
AATATCA	15	0.0082196705	50.291473	36
TCAGTCA	15	0.0082196705	50.291473	36
TAAGACC	15	0.008234579	50.26844	35
TTATACT	20	4.0861152E-4	50.199455	43
ATTATAC	20	4.0861152E-4	50.199455	42
TATACTA	20	4.0861152E-4	50.199455	44
TAATCCG	15	0.008279428	50.19945	42
GTTACAG	15	0.008309427	50.153564	34
CAAACAT	15	0.0083395075	50.107765	14
TCGTGAT	20	4.1324768E-4	50.084896	12
ACTAATC	20	4.1324768E-4	50.084896	10
GACCCAC	15	0.008369668	50.062046	9
GACGGAA	15	0.008369668	50.062046	9
CGATTAA	40	2.6157068E-9	50.062042	49
GACTAAT	20	4.141799E-4	50.062042	9