SRR1526058_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526058_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	55488
Sequences flagged as poor quality	0
Sequence length	56
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCGGGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	413	0.7443050749711649	No Hit
TCGGGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	260	0.46856978085351786	No Hit
TCGGGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	156	0.28114186851211076	No Hit
TCGGGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTCTTCC	140	0.25230680507497116	No Hit
TCGGGTGGGACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT	79	0.1423731257208766	No Hit
TCGGGTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT	77	0.13876874279123416	No Hit
TCGGGTGGGGGAGCTGGAGAGATGGCTCAGTGGTTAAGAGCATCCTCTGCTCTTCC	66	0.1189446366782007	No Hit
TCGGGTGGGGACGCTACTCAGACTACCCAGATGCTTACACCACATGAAACACTGTC	59	0.10632929642445214	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AATTATA	15	0.008046013	50.52979	41
TTCGTCA	15	0.008075243	50.483517	40
ACATGTG	15	0.008075243	50.483517	40
AACCCTT	20	3.9742474E-4	50.43733	37
ACCCTTG	20	3.9742474E-4	50.43733	38
GGCGCAT	15	0.0081045525	50.43733	37
TATAATT	15	0.0081045525	50.43733	38
AAATATA	20	4.0103245E-4	50.345207	35
AATATAA	20	4.0103245E-4	50.345207	36
TTCGCCC	20	4.0103245E-4	50.345207	35
TCGCCCC	15	0.008163407	50.345203	36
CCCGTGT	20	4.0284605E-4	50.29927	34
CAAATAT	25	1.9898192E-5	50.29927	34
ACTATTA	15	0.008192955	50.299267	47
ACCGCTC	15	0.00822258	50.253418	45
TTATACT	20	4.0832598E-4	50.161964	43
ATTATAC	30	1.0068907E-6	50.161964	42
GTCGGCG	15	0.008282071	50.161964	48
ATGGGAG	15	0.008402014	49.980053	30
TTGGCGC	15	0.008402014	49.980053	29