SRR1526041_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526041_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6022
Sequences flagged as poor quality	0
Sequence length	40
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCGGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGC	49	0.8136831617402857	No Hit
GTCGGTGGGGGGCTGGTGAGATGGCTCCGTGGGTAAGAGC	26	0.4317502490866822	No Hit
GTCGGTGGGGGGCTGGTGCGATGGCTCAGTGGGTAAGAGC	21	0.34872135503155094	No Hit
GTCGGTGGGGGGCTGGTGCGATGGCTCCGTGGGTAAGAGC	20	0.33211557622052473	No Hit
GTCGGTGGGGGGGCTGGTGAGATGGCTCCGTGGGTAAGAG	12	0.19926934573231483	No Hit
GTCGGTGGGGGGGTTGGGGATTTAGCTCCGTGGTAGAGCG	10	0.16605778811026237	No Hit
GTCGGTGGGGGGCTGGTGAGATGGCTCAGTGGGTCAGAGC	9	0.14945200929923613	No Hit
GTCGGTGGGGTCGACTTTTTTTTTTTTTTTTTTTTTTTTT	8	0.1328462304882099	No Hit
GTCGGTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCC	8	0.1328462304882099	No Hit
GTCGGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAG	8	0.1328462304882099	No Hit
GTCGGTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCG	7	0.11624045167718366	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGGGGC	25	1.76315E-4	34.109245	6
TGGGGAG	30	1.22458005E-5	34.109245	6
GTGGGGT	50	2.746674E-10	34.109245	5
GTGGGGC	50	2.746674E-10	34.109245	5
GGTGGGC	50	2.746674E-10	34.109245	4
TGGGATC	25	1.76315E-4	34.109245	6
TGGGGTC	20	0.0025327567	34.10924	6
TGGGGCC	20	0.0025327567	34.10924	6
GTGGGGA	70	0.0	34.10924	5
GTGGGAT	70	0.0	34.10924	5
GTGGGAC	20	0.0025327567	34.10924	5
TGGGATT	20	0.0025327567	34.10924	6
TGGGATG	20	0.0025327567	34.10924	6
GGTGGGG	310	0.0	33.559093	4
GTCGGTG	605	0.0	32.981667	1
TCGGTGG	585	0.0	32.943115	2
CGGTGGG	575	0.0	32.922836	3
GTGGGGG	140	0.0	32.891056	5
TGGGGGG	105	0.0	32.484993	6
GGTGGGA	170	0.0	32.102818	4