SRR1526025_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526025_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12297
Sequences flagged as poor quality	0
Sequence length	40
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGCAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCT	105	0.8538667967797022	No Hit
CGGCAGGGGTACCTGGTTGATCCTGCCCGTAGCATATGCT	51	0.4147353012929983	No Hit
CGGCAGGGGTACCTGGTTGATCCTGCCCGTAGCCTATGCT	43	0.3496787834431162	No Hit
CGGCAGGGGTACCTGGTTGATCCTGCCAGTAGCCTATGCT	40	0.32528258924941045	No Hit
CGGCAGGGGATGCCACAACTAGATACATCAACATGATTTA	28	0.2276978124745873	No Hit
CGGCAGGGGTGAGATGGACTTAAAGGAATTGACGGGTACG	23	0.187037488818411	No Hit
CGGCAGGGGTACCTGGTTCATCCTGCCAGTAGCATATGCT	17	0.1382451004309994	No Hit
CGGCAGGGGTGAGATGGACTTAAATGAATTGACGGGTACG	14	0.11384890623729366	No Hit
CGGCAGGGGTACCTGGTTGATCCTGCCAGTAGCATCTGCT	14	0.11384890623729366	No Hit
CGGCAGGGGTACCTGGTTGATCCTGCCAGTAGCCTCTGCT	14	0.11384890623729366	No Hit
CGGCAGGGGGTCGACTTTTTTTTTTTTTTTTTTTTTTTTT	13	0.10571684150605838	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGAATT	30	1.3417317E-5	34.094265	24
TTGACGG	30	1.3417317E-5	34.094265	29
TGAATTG	30	1.3417317E-5	34.094265	25
GGGTACG	20	0.0026465582	34.09426	34
GACGGGT	25	1.8824515E-4	34.09426	31
TGCCCGT	25	1.8824515E-4	34.09426	24
CGGGTAC	25	1.8824515E-4	34.09426	33
ACGGGTA	25	1.8824515E-4	34.09426	32
ATTGACG	25	1.8824515E-4	34.09426	28
TGACGGG	25	1.8824515E-4	34.09426	30
AGGGGTT	30	1.3803248E-5	33.9551	5
AGGGGTC	20	0.0027006154	33.9551	5
AGGGGTA	70	0.0	33.9551	5
GATGGAC	40	7.097515E-8	33.9551	13
AGGGGGG	175	0.0	33.9551	5
AGGGGGC	65	0.0	33.9551	5
AGGGGGA	75	0.0	33.9551	5
AGGGGCT	55	2.5465852E-11	33.9551	5
AGGGGCC	35	9.893902E-7	33.9551	5
AGGGGCA	35	9.893902E-7	33.9551	5