SRR1526010_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526010_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	29660
Sequences flagged as poor quality	0
Sequence length	56
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TAGCATGGGTCACAGATCCTCTTCTGAGATGAGTTTTTGTTCAATCCGCCCAATCT	226	0.7619689817936615	No Hit
TAGCATGGGTCACAGATCCTCTTCTGAAGGAGATTGGGCGGATTGAACAAAAACTC	193	0.6507080242751181	No Hit
TAGCATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	167	0.5630478759271746	No Hit
TAGCATGGGTCACAGATCCTCTTCTGAGATGAGTTTTTGTTCAATCCGCCCAAAAA	73	0.2461227242076871	No Hit
TAGCATGGGACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT	60	0.20229265003371544	No Hit
TAGCATGGGTCACAGATCCTCTTCTGAAGGAGATTGGGCGCATTGAACAAAAACTC	58	0.19554956169925827	No Hit
TAGCATGGGTCACAGATCCTCTTCTGAGATGAGTTTTTGTCCAATCCGCCCAATCT	56	0.18880647336480108	No Hit
TAGCATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	55	0.18543492919757248	No Hit
TAGCATGGGACTAATCCTAGCCCTAGCCCTACACAAATATCATTATACTATTATAT	47	0.15846257585974377	No Hit
TAGCATGGGGAGCTCCATTATGCTTTGGCAGGTGATCAGACTGAAGCGTAAATGGA	40	0.13486176668914363	No Hit
TAGCATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	36	0.12137559002022927	No Hit
TAGCATGGGGATCCCCTCGACCACTCTTTTGGCGCTTCGCTGTCGACAGTGCGCTT	34	0.11463250168577209	No Hit
TAGCATGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGCGCA	32	0.10788941335131491	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATAATT	15	0.007866333	50.759037	38
ATAATTA	15	0.007866333	50.759037	39
TAATTAT	15	0.007866333	50.759037	40
GCGCATT	30	9.127525E-7	50.759037	38
CGCATTG	30	9.127525E-7	50.759037	39
ACTGACT	15	0.007920128	50.67182	41
AATTATA	15	0.007920128	50.67182	41
CATTGAA	20	3.8541263E-4	50.671818	41
CGTCTCA	20	3.8541263E-4	50.671818	41
GGCGCAT	30	9.3475865E-7	50.584908	37
TGCTCGT	15	0.007974196	50.584908	37
AATACCA	15	0.007974196	50.584908	37
TATGCTC	15	0.008028539	50.49829	35
AGAGCGC	15	0.008028539	50.49829	35
AATATAA	15	0.008028539	50.49829	36
ATCCTAG	25	2.0008696E-5	50.154762	14
ACTAATC	25	2.0008696E-5	50.154762	10
TGGTTGA	40	2.4629117E-9	50.154762	14
AATCCTA	25	2.0008696E-5	50.154762	13
GGTTGAT	40	2.4629117E-9	50.154762	15