SRR1525969_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1525969_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2020
Sequences flagged as poor quality	0
Sequence length	40
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCAAAGGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTT	12	0.594059405940594	No Hit
TCAAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGC	6	0.297029702970297	No Hit
TCAAAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCT	6	0.297029702970297	No Hit
TCAAAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCG	6	0.297029702970297	No Hit
TCAAAGGGGGTCGACTTTTTTTTTTTTTTTTTTTTTTTTT	5	0.24752475247524752	No Hit
TCAAAGGGGGGGCTGGTGCGATGGCTCAGTGGGTAAGAGC	5	0.24752475247524752	No Hit
TCAAAGGGGCGTGCACTTTTCTTCACTGAGACTGGGAAAG	4	0.19801980198019803	No Hit
TCAAAGGGGGGGGCTGGTGAGATGGCTCCGTGGGTAAGAG	4	0.19801980198019803	No Hit
TCAAAGGGGATCAGAGTCCCTTTTACTTCTCTGTGAGTGA	4	0.19801980198019803	No Hit
TCAAAGGGGGGGCTGGTGAGATGGCTCCGTGGGTAAGAGC	4	0.19801980198019803	No Hit
TCAAAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCC	4	0.19801980198019803	No Hit
TCAAAGGGGGCTGGTGAGATGGCTCAGTGGTTAAGAGCAC	3	0.1485148514851485	No Hit
TCAAAGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTT	3	0.1485148514851485	No Hit
TCAAAGGGGGGGGTTGGGGATTTAGCTCCGTGGTAGAGCC	3	0.1485148514851485	No Hit
TCAAAGGGGGGGGTTGGGGATTTAGCTCCGTGGTAGAGCG	3	0.1485148514851485	No Hit
TCAAAGGGGGGGGCTGGTCAGATGGCTCCGTGGGTAAGAG	3	0.1485148514851485	No Hit
TCAAAGGGGTACTTTTTGTTTTGTTTTGTTTTCTAGACAC	3	0.1485148514851485	No Hit
TCAAAGGGGATCAGAGTCACTTTTACTTCTCTGTGAGTGA	3	0.1485148514851485	No Hit
TCAAAGGGGGAGTCGCCTTTTTTTTTTTTTTTTTTTTTTT	3	0.1485148514851485	No Hit
TCAAAGGGGCAGAGTCGATTTTTTTTTTTTTTTTTTTTTT	3	0.1485148514851485	No Hit
TCAAAGGGGGGGGTTGGGGATTTAGCTCCGTGGTACAGCC	3	0.1485148514851485	No Hit
TCAAAGGGGCCATCTCATCCCTGCGTGTCTCCGACTCCGA	3	0.1485148514851485	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGGGGT	20	0.0022336377	33.825	5
AGGGGGG	50	1.10958354E-10	33.825	5
AGGGGGC	25	1.4381566E-4	33.825	5
AGGGGAT	20	0.0022336377	33.825	5
AAGGGGG	105	0.0	33.825	4
AAGGGGC	20	0.0022336377	33.825	4
AAGGGGA	50	1.10958354E-10	33.825	4
TCAAAGG	195	0.0	33.825	1
GGGGGGG	30	9.06274E-6	33.825	6
AAAGGGG	190	0.0	33.825	3
CAAAGGG	190	0.0	33.825	2
GGGGGGC	25	0.006671144	27.060001	7
GGGGCTG	25	0.006671144	27.060001	9
GGGCTGG	25	0.006671144	27.060001	10