SRR1525910_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1525910_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	72918
Sequences flagged as poor quality	0
Sequence length	56
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

$Per base sequence content$

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTAACTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	801	1.098494198963219	No Hit
TTAACTGGGTCACAGATCCTCTTCTGAAGGAGATTGGGCGGATTGAACAAAAACTC	655	0.8982692887901479	No Hit
TTAACTGGGTCACAGATCCTCTTCTGAGATGAGTTTTTGTTCAATCCGCCCAATCT	610	0.8365561315450233	No Hit
TTAACTGGGTCACAGATCCTCTTCTGAAGGAGATTGGGCGCATTGAACAAAAACTC	255	0.3497078910557064	No Hit
TTAACTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	240	0.32913683864066484	No Hit
TTAACTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	167	0.22902438355412927	No Hit
TTAACTGGGTCACAGATCCTCTTCTGAGATGAGTTTTTGTCCAATCCGCCCAATCT	160	0.2194245590937766	No Hit
TTAACTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	147	0.2015963136674072	No Hit
TTAACTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	103	0.14125455991661867	No Hit
TTAACTGGGTCACAGATCCTCTTCTGAGATGAGTTTTTGTTCAATCCGCCCAAAAA	102	0.13988315642228258	No Hit
TTAACTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCCAAGATTAAG	97	0.13302613895060206	No Hit
TTAACTGGGGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCGTGCATTTATCAGAT	86	0.11794070051290491	No Hit
TTAACTGGTCACAGATCCTCTTCTGAGATGAGTTTTTGTTCAATCCGCCCAATCTC	81	0.1110836830412244	No Hit
TTAACTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCCACGATTAAG	75	0.10285526207520776	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGATTGA	30	9.802279E-7	50.389584	40
GCGCATT	95	0.0	50.389584	38
CGCTTCT	25	1.9750638E-5	50.389584	40
AGCCTTC	20	4.0151554E-4	50.354618	39
CGCATTG	85	0.0	50.354614	39
GTCTAAT	15	0.0081678	50.354614	39
CTCATAC	15	0.0081678	50.354614	39
CGCTTGC	15	0.0081678	50.354614	39
AGCGCTT	15	0.008212745	50.284824	37
GAGCCGA	15	0.008212745	50.284824	37
TGCTCGT	35	4.969843E-8	50.284824	37
ACCATAG	20	4.056626E-4	50.25	34
CATAGCC	20	4.056626E-4	50.25	36
CTCACTA	20	4.070525E-4	50.215225	45
TATATTC	25	2.0243291E-5	50.180496	14
CACGATT	25	2.0243291E-5	50.180496	47
ATATTCC	25	2.0243291E-5	50.180496	15
TAATCCG	15	0.008280506	50.180496	42
CGACTCC	15	0.008303186	50.14582	44
ACCTGGT	205	0.0	50.076603	11