SRR1525901_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1525901_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4022
Sequences flagged as poor quality	0
Sequence length	40
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCAGACGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTT	14	0.34808552958727	No Hit
CCAGACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCT	9	0.22376926902038788	No Hit
CCAGACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGC	8	0.19890601690701143	No Hit
CCAGACGGGTACGCACAGTTCTGAGTCGGAGACACGCAGG	8	0.19890601690701143	No Hit
CCAGACGGGGGGGCTGGTGAGATGGCTCCGTGGGTAAGAG	7	0.174042764793635	No Hit
CCAGACGGGGGGCTGGTGAGATGGCTCCGTGGGTAAGAGC	7	0.174042764793635	No Hit
CCAGACGGGTACGAGATTTTTTTTTTTTTTTTTTTTTTTT	7	0.174042764793635	No Hit
CCAGACGGGGTCGACTTTTTTTTTTTTTTTTTTTTTTTTT	7	0.174042764793635	No Hit
CCAGACGGGATCCTAATGTGCGCCCTGTACCTTTGGAACT	5	0.12431626056688214	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGGGG	55	1.6370905E-11	33.825	6
CGGGGAG	25	1.7427708E-4	33.825	6
GACGGGA	115	0.0	33.825	4
CGGGACA	20	0.0025346638	33.825	6
ACGGGGT	20	0.0025346638	33.825	5
ACGGGGG	85	0.0	33.825	5
ACGGGGA	30	1.1903176E-5	33.825	5
ACGGGAC	30	1.1903176E-5	33.825	5
ACGGGAA	55	1.6370905E-11	33.825	5
GGAAGCA	20	0.0025346638	33.825	8
GGGACAT	20	0.0025346638	33.825	7
GACGGGC	45	3.616151E-9	33.824997	4
CGGGAAG	35	8.070201E-7	33.824997	6
CCAGACG	395	0.0	33.396835	1
CAGACGG	390	0.0	33.391346	2
AGACGGG	375	0.0	33.374	3
GACGGGG	160	0.0	32.767967	4
GGGGGGG	25	0.0075588454	27.060001	7
ACGGGGC	25	0.0075588454	27.060001	5
GGGAAGC	25	0.0075588454	27.060001	7