SRR1525809_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1525809_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2626
Sequences flagged as poor quality	0
Sequence length	40
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATCAACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGC	9	0.3427265803503427	No Hit
ATCAACGGGATGCCACAACTAGATACATCAACATGATTTA	7	0.26656511805026656	No Hit
ATCAACGGGGGGCTGGTGAGATGGCTCCGTGGGTAAGAGC	7	0.26656511805026656	No Hit
ATCAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAG	6	0.2284843869002285	No Hit
ATCAACGGGCAGCGACTTTTTTTTTTTTTTTTTTTTTTTT	5	0.19040365575019041	No Hit
ATCAACGGGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTT	5	0.19040365575019041	No Hit
ATCAACGGGGGGCTGGTGCGATGGCTCAGTGGGTAAGAGC	4	0.15232292460015232	No Hit
ATCAACGGGCTACGAAGACCTTTTTTTTTTTTTTTTTTTT	4	0.15232292460015232	No Hit
ATCAACGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCC	4	0.15232292460015232	No Hit
ATCAACGGGGGGAATTCGTGGAGAAAGAAATGGCTCCTCT	4	0.15232292460015232	No Hit
ATCAACGGGGGAGACTTGTCGCCTTATGGTTTCCATGTTG	4	0.15232292460015232	No Hit
ATCAACGGGATGCCCCAACTAGATACATCAACATGATTTA	3	0.11424219345011424	No Hit
ATCAACGGGATCCCAAGGCGTATTTTGAAAGTTTGAATGC	3	0.11424219345011424	No Hit
ATCAACGGGTACCTGGTTGATCCTGCCCGTAGCATATGCT	3	0.11424219345011424	No Hit
ATCAACGGGGGGGCTGGTGAGATGGCTCCGTGGGTAAGAG	3	0.11424219345011424	No Hit
ATCAACGGGGGGCTGGAGCGATGGCTCAGCCGTTAAAGGC	3	0.11424219345011424	No Hit
ATCAACGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGC	3	0.11424219345011424	No Hit
ATCAACGGGGTCGACTTTTTTTTTTTTTTTTTTTTTTTTT	3	0.11424219345011424	No Hit
ATCAACGGGCTCTCTTGCTTCTCTCTCTTGCTTTTTCGCT	3	0.11424219345011424	No Hit
ATCAACGGGTATCAACGCAGAGTCTTTTTTTTTTTTTTTT	3	0.11424219345011424	No Hit
ATCAACGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTT	3	0.11424219345011424	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGGGG	35	5.585589E-7	34.52941	6
ACGGGGG	70	0.0	34.52941	5
ACGGGGC	20	0.0021331087	34.52941	5
ACGGGGA	30	8.867131E-6	34.52941	5
ACGGGCT	20	0.0021331087	34.52941	5
AACGGGT	30	8.867131E-6	34.52941	4
AACGGGC	45	2.1027518E-9	34.52941	4
AACGGGA	30	8.867131E-6	34.52941	4
TCAACGG	260	0.0	33.865383	2
CAACGGG	250	0.0	33.83882	3
AACGGGG	145	0.0	33.33874	4
ATCAACG	265	0.0	33.226418	1
ACGGGGT	25	0.0063696504	27.62353	5