SRR1926994_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926994_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	597796
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	1664	0.2783558270714424	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1021	0.17079405014419635	No Hit
GTCCTACAGTGGACATTTCTAAATT	1010	0.16895395753735387	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1010	0.16895395753735387	No Hit
TATCAACGCAGAGTACTTTTTTTTT	854	0.14285809874940616	No Hit
GTCCTACAGTGTGCATTTCTCATTT	803	0.13432676029950016	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	719	0.12027514402906678	No Hit
CTTTAGGACGTGAAATATGGCGAGG	709	0.1186023325683009	No Hit
GTACATGGGAAGCAGTGGTATCAAC	691	0.11559127193892231	No Hit
CTGTAGGACCTGGAATATGGCGAGA	653	0.10923458838801196	No Hit
CACACACACACACACACACACACAC	611	0.10220878025279526	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATAAT	95	2.8376235E-10	15.063846	1
TTAAGAC	65	3.2610533E-6	14.659089	3
GGGTAAT	40	0.0051274765	14.310655	1
TGTAGGA	620	0.0	13.69399	2
GTAGGAC	585	0.0	13.681817	3
GTCCTAT	105	1.2787496E-9	13.629194	1
CTGTAGG	645	0.0	13.608064	1
TAGGACC	240	0.0	13.498578	4
GTACTAG	65	5.2288433E-5	13.209834	1
AGGACGT	485	0.0	12.57357	5
GACGTGG	280	0.0	12.539469	7
GGACGTG	475	0.0	12.437079	6
TAGGACT	100	1.3817953E-7	12.386931	4
GTGCTAA	55	0.002968649	12.142373	1
TAGGACG	500	0.0	12.005795	4
TTACACT	80	2.7733427E-5	11.91051	4
AGGACCT	370	0.0	11.846128	5
TAGGACA	235	0.0	11.758461	4
AAGACAG	130	2.4792826E-9	11.727271	5
TAGCCTC	75	2.0131023E-4	11.43409	5