SRR1926992_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926992_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	356172
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	1053	0.2956436777736599	No Hit
GTCCTACAGTGGACATTTCTAAATT	654	0.18361915029817052	No Hit
GGTATCAACGCAGAGTACTTTTTTT	632	0.17744235930954708	No Hit
GTCCTACAGTGTGCATTTCTCATTT	577	0.1620003818379884	No Hit
TATCAACGCAGAGTACTTTTTTTTT	552	0.15498130116909808	No Hit
CTGTAGGACGTGGAATATGGCAAGA	504	0.1415046662848287	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	443	0.12437810945273632	No Hit
GTGTGTGTGTGTGTGTGTGTGTGTG	391	0.10977842166144448	No Hit
GTACATGGGAAGCAGTGGTATCAAC	363	0.10191705131228732	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTGATCA	30	7.781473E-4	18.972763	9
GGGCACT	35	0.002186637	16.26237	11
GTTCTAG	40	0.005143015	14.301856	1
ACTGATC	40	0.0052450174	14.259603	8
TAGGACC	160	0.0	13.680849	4
GTTCTAA	50	0.0014551816	13.348398	1
CTAGGAC	50	0.0014644972	13.337108	3
TAACACC	50	0.0014754299	13.3239565	4
GTAGCCC	115	3.5652192E-10	13.254268	3
CTGGAGT	65	5.338498E-5	13.177541	4
GTTCAGA	60	3.955109E-4	12.712761	1
CTTGTAC	60	3.9834657E-4	12.702006	3
TGTAGCC	120	7.003109E-10	12.702006	2
GTATATC	115	5.0513336E-9	12.425877	3
TGTAGGA	355	0.0	12.344203	2
CCTACAC	70	1.0584377E-4	12.2483635	3
GGCTAAG	55	0.0029782727	12.134907	1
CTACACC	55	0.003019459	12.112689	4
GCACAGT	55	0.0030290328	12.107573	6
GACGTGG	150	1.2732926E-11	12.049918	7