SRR1926992_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926992_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	356172
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	1672	0.469436115135384	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1219	0.34225037341509157	No Hit
TATCAACGCAGAGTACTTTTTTTTT	905	0.2540907202138293	No Hit
GTCCTACAGTGGACATTTCTAAATT	635	0.17828464898981392	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	613	0.17210785800119044	No Hit
CTGTAGGACGTGGAATATGGCAAGA	586	0.1645272508787889	No Hit
GTCCTACAGTGTGCATTTCTCATTT	543	0.15245443212829757	No Hit
CACACACACACACACACACACACAC	537	0.1507698527677639	No Hit
GTGTGTGTGTGTGTGTGTGTGTGTG	464	0.13027413721460418	No Hit
GTACATGGGAAGCAGTGGTATCAAC	454	0.12746650494704806	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	425	0.11932437137113529	No Hit
CTTTAGGACGTGAAATATGGCGAGG	404	0.11342834360926744	No Hit
CTGTAGGACCTGGAATATGGCGAGA	386	0.10837460552766641	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAGGAC	55	1.0945301E-5	15.5882435	3
TAGGACC	120	3.6379788E-12	14.2872095	4
CTGATCA	40	0.005315261	14.231047	9
AGTGTCC	40	0.005315261	14.231047	8
GGCGAGG	85	2.7230817E-7	13.393926	19
AAACAGC	50	0.0014664677	13.334728	6
GTGTAGC	115	3.5470293E-10	13.25938	1
AGAACTG	65	5.2981497E-5	13.188194	5
GTATAAG	60	3.9705224E-4	12.706905	1
CCTGAAG	60	3.984725E-4	12.701531	3
TAGACAG	75	1.4320654E-5	12.699741	5
TAATACA	70	1.0602031E-4	12.24618	4
TGCACAG	70	1.0602031E-4	12.24618	5
GTCCTAC	340	0.0	12.052874	1
CCCTGTA	80	2.760683E-5	11.912724	2
TAGAGTG	65	7.823616E-4	11.722839	5
CTACTCT	65	7.823616E-4	11.722839	4
TCAGATG	65	8.0865866E-4	11.676757	14
TGTAGCC	140	6.366463E-10	11.57236	2
TGGCGAG	245	0.0	11.229942	18