SRR1926986_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926986_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	412534
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	1575	0.3817867133375673	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1072	0.25985736933198234	No Hit
TATCAACGCAGAGTACTTTTTTTTT	878	0.21283094241929149	No Hit
CACACACACACACACACACACACAC	658	0.15950200468325035	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	586	0.1420488977878187	No Hit
GTGTGTGTGTGTGTGTGTGTGTGTG	523	0.126777429254316	No Hit
GTCCTACAGTGGACATTTCTAAATT	514	0.12459579089238704	No Hit
CTGTAGGACGTGGAATATGGCAAGA	473	0.11465721613248847	No Hit
GTCCTACAGTGTGCATTTCTCATTT	438	0.1061730669472092	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	105	5.456968E-12	15.413943	4
CTCGAAC	50	8.773868E-5	15.182733	18
TAGCACT	85	1.6569174E-8	14.560576	4
GATTTAA	40	0.0051541626	14.29796	1
CCTCGAA	55	1.9735971E-4	13.802485	17
TCGAACT	55	1.9735971E-4	13.802485	19
ATTATAC	50	0.0014723106	13.328528	3
GACTTGG	50	0.0015091617	13.284891	7
GTCCTAC	290	0.0	13.14755	1
CCTGGAC	90	5.234815E-7	12.693836	3
TAGGACT	60	4.0075585E-4	12.693836	4
GCCTCGA	60	4.1200203E-4	12.652278	16
GTGTAGG	70	1.05356194E-4	12.255395	1
AGTACTA	55	0.0030131033	12.116844	5
TGCCTAA	55	0.0030880522	12.077175	10
AGGTCTT	55	0.0030880522	12.077175	7
GGGGCAT	80	2.8878078E-5	11.86151	11
GTATAGT	65	7.7789696E-4	11.73166	1
GTAGGAC	240	0.0	11.503789	3
AGGACCT	200	0.0	11.424453	5