SRR1926970_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926970_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	672683
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	2392	0.35559096929757406	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1950	0.28988394236215276	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1608	0.23904275862479057	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1553	0.23086654486585806	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1293	0.19221535255090436	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1070	0.15906452221923253	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1064	0.158172571627349	No Hit
GTACATGGGAAGCAGTGGTATCAAC	702	0.10435821925037499	No Hit
CTGAAGGACCTGGAATATGGCGAGA	692	0.10287163493056907	No Hit
GGTATCAACGCAGAGTACTTTTTTT	688	0.10227700120264671	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	430	0.0	15.057732	4
CCCCTAC	60	2.4531459E-5	14.316907	1
ATAGGAC	100	6.202754E-10	14.304061	3
GACGTGG	475	0.0	13.424736	7
TCGAACT	50	0.0015193765	13.27502	19
GCAAAAA	50	0.0015202281	13.274032	13
CTAGTAC	65	5.2534306E-5	13.203748	3
GGACGTG	915	0.0	12.899046	6
AGGACGT	940	0.0	12.859759	5
GGACCTG	670	0.0	12.7857065	6
AGGACCT	700	0.0	12.645671	5
GGCGAGG	435	0.0	12.642876	19
GTAGGAC	1110	0.0	12.3710785	3
TGTAGGA	1145	0.0	12.3269825	2
GTCCTAT	125	1.3042154E-9	12.217094	1
TCTAGAC	55	0.0029795887	12.136778	3
TAGGACG	1015	0.0	12.1016	4
CCAACGA	55	0.003108797	12.068199	19
TATACTG	95	1.013077E-6	12.023049	5
ACTGTTC	175	0.0	11.955981	8