SRR1926970_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926970_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	672683
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	2474	0.3677809607199825	No Hit
CTGTAGGACGTGGAATATGGCAAGA	2399	0.35663157832143816	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1911	0.2840862635149097	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1702	0.25301665123096617	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1656	0.24617836335985893	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1577	0.23443434723339224	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1426	0.211986924004323	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1151	0.17110585520966043	No Hit
TATCAACGCAGAGTACTTTTTTTTT	983	0.14613123863692112	No Hit
GTACATGGGAAGCAGTGGTATCAAC	856	0.12725161777538602	No Hit
CTGAAGGACCTGGAATATGGCGAGA	846	0.12576503345558013	No Hit
CACACACACACACACACACACACAC	703	0.10450687768235559	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGGCGT	40	2.7023637E-4	16.669613	6
AGGCGTG	40	2.7818594E-4	16.60639	7
ATTAGGC	40	0.005181998	14.2882395	3
TCCAACG	60	2.6003096E-5	14.228757	18
CCAGACT	55	1.9135352E-4	13.855263	4
TAGGACC	395	0.0	13.745647	4
GGACGTG	945	0.0	12.902254	6
AGGACGT	995	0.0	12.5411005	5
GACGTGA	425	0.0	12.503634	7
TGTAGGA	1225	0.0	12.298795	2
AGGACAC	70	1.0622053E-4	12.247062	5
TAGGACG	1020	0.0	12.233721	4
GGACCTG	745	0.0	12.146602	6
GTCCTAA	515	0.0	12.037743	1
GACGTGG	565	0.0	11.924689	7
CTGTAGG	1200	0.0	11.921995	1
TAAGAGT	80	2.78327E-5	11.906866	4
GCCATAT	345	0.0	11.887438	1
GTAGGAC	1170	0.0	11.886512	3
AGGACCT	785	0.0	11.770354	5