SRR1926969_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926969_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	482673
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	1901	0.39384842325963954	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1158	0.23991397902928072	No Hit
GTCCTACAGTGGACATTTCTAAATT	1059	0.21940319843869452	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1032	0.21380934918671649	No Hit
TATCAACGCAGAGTACTTTTTTTTT	971	0.2011713934692846	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	828	0.17154471039399344	No Hit
GTCCTACAGTGTGCATTTCTCATTT	807	0.16719393875356608	No Hit
CTTTAGGACGTGAAATATGGCGAGG	755	0.1564205994534602	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	663	0.1373600760763498	No Hit
GTACATGGGAAGCAGTGGTATCAAC	656	0.13590981886287404	No Hit
CTGTAGGACCTGGAATATGGCGAGA	631	0.13073032881474622	No Hit
CCCATGTACTCTGCGTTGATACCAC	507	0.10504005817603221	No Hit
CACACACACACACACACACACACAC	494	0.10234672335100575	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCTAGG	50	0.0014524083	13.3533745	1
TAGGACC	280	0.0	12.927093	4
GGCGAGG	200	0.0	12.331483	19
GTCTAGA	55	0.0029726091	12.139433	1
AGGGTGT	55	0.0030029062	12.123015	6
TGGCGAG	545	0.0	12.009488	18
AGGACCT	405	0.0	11.994729	5
GGACCTG	410	0.0	11.61613	6
TTGAACA	75	2.0178196E-4	11.430271	4
ATGGCGA	580	0.0	11.284779	17
GGCGAGA	355	0.0	11.222584	19
CTTATAG	60	0.0057465485	11.113921	3
CAGGAGT	60	0.005751002	11.112764	4
TAGGGCT	60	0.005751002	11.112764	4
AGATCAC	60	0.0059270184	11.0678625	10
GCTGTAC	60	0.0059270184	11.0678625	8
TATGGCG	600	0.0	11.066715	16
GTAGGAC	605	0.0	11.02207	3
GTACAAG	70	0.0014392453	10.900715	1
TTAGACT	70	0.0014555954	10.885973	4