SRR1926962_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926962_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	658533
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTAGGACGTGGAATATGGCAAGA	1736	0.2636162500588429	No Hit
GTCCTACAGTGGACATTTCTAAATT	1702	0.25845325898626187	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1368	0.2077344643320836	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1214	0.18434915182686365	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1205	0.18298247771941575	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1143	0.17356761164588563	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1011	0.15352305806998284	No Hit
GGTATCAACGCAGAGTACTTTTTTT	874	0.1327192411010534	No Hit
GTACATGGGAAGCAGTGGTATCAAC	740	0.11237098216793995	No Hit
TATCAACGCAGAGTACTTTTTTTTT	698	0.10599316966651634	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCCTAA	300	0.0	13.982129	1
TAGGACC	355	0.0	13.147562	4
TCCAACG	65	5.5060395E-5	13.137758	18
TAGGACT	110	2.6266207E-9	12.989011	4
GGCGAGG	320	0.0	12.7500105	19
TAGGATA	75	1.4357382E-5	12.700367	4
GGTGCCC	60	4.136812E-4	12.648291	8
TATTAAG	55	0.0029859715	12.133252	2
GATAGTG	55	0.0030969626	12.0742855	7
TGTAGGA	965	0.0	11.854843	2
GTAGGAC	945	0.0	11.794096	3
TACACTG	375	0.0	11.684337	5
CCTGTAC	115	6.782648E-8	11.59687	3
TCCTAAA	355	0.0	11.54734	2
GGACGTG	770	0.0	11.504553	6
AGGACCT	540	0.0	11.465609	5
CTGTAGG	965	0.0	11.4596815	1
AGGACGT	820	0.0	11.267702	5
CTAAAGT	365	0.0	11.221556	4
AATCCCG	85	5.3784563E-5	11.162801	19