SRR1926961_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926961_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	647840
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1544	0.23833045196344776	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1496	0.23092121511484315	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1424	0.21980735984193628	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1291	0.19927759940726106	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1137	0.17550629785132132	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1106	0.17072116571993085	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1011	0.15605705112373425	No Hit
GGTATCAACGCAGAGTACTTTTTTT	858	0.13244010866880712	No Hit
GTACATGGGAAGCAGTGGTATCAAC	787	0.12148061249691283	No Hit
TATCAACGCAGAGTACTTTTTTTTT	725	0.11191034823413187	No Hit
CCCATGTACTCTGCGTTGATACCAC	652	0.1006421338602124	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCTTAG	65	1.8436367E-7	16.125652	1
GTTGTAG	55	1.9077458E-4	13.8600645	1
AGCACCG	55	1.9253838E-4	13.84504	5
AACTGTC	50	0.0015074295	13.288812	7
TCAAGAC	75	1.44510195E-5	12.69227	3
ATTTAGA	185	0.0	12.361678	1
GACGTGG	390	0.0	12.169242	7
TAGGACC	505	0.0	12.063006	4
TGTAGGA	1030	0.0	12.025701	2
CCTATAC	80	2.8017848E-5	11.899003	3
GGCGAGG	320	0.0	11.861348	19
TTTAGAA	185	0.0	11.845691	2
TATACTG	145	9.276846E-11	11.816027	5
TCCTATA	105	2.6084308E-7	11.79664	2
CTGTAGG	1005	0.0	11.567292	1
CGTGGAA	380	0.0	11.488553	9
TCAGGAC	100	1.8774826E-6	11.423042	3
GGACGTG	730	0.0	11.3439245	6
GTAGGAC	985	0.0	11.307073	3
AGGACGT	750	0.0	11.295246	5