SRR1926960_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926960_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	639118
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1816	0.2841415826185462	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1803	0.28210752943900813	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1436	0.22468464352435702	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1419	0.22202472782803803	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1416	0.22155533094045232	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1359	0.21263679007632394	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1066	0.16679236072212017	No Hit
GGTATCAACGCAGAGTACTTTTTTT	863	0.13502983799548754	No Hit
TATCAACGCAGAGTACTTTTTTTTT	763	0.11938327507596405	No Hit
CTGAAGGACCTGGAATATGGCGAGA	690	0.10796128414471193	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAGGAC	80	7.4342097E-9	15.476491	3
TAGGACC	360	0.0	14.549405	4
CTATACC	60	2.5051593E-5	14.28487	4
GGCGAGG	340	0.0	13.115047	19
TGTAGGA	975	0.0	13.004984	2
TAGGACT	110	2.6357156E-9	12.986245	4
CTCCTAG	60	3.9657566E-4	12.711638	1
GTCTAGA	75	1.4225399E-5	12.7116375	1
CTATTCT	75	1.4387293E-5	12.697661	4
GTAGGAC	930	0.0	12.493843	3
GACGTGG	380	0.0	12.486459	7
ATACTTA	55	0.0030094313	12.120496	6
CTGTAGG	940	0.0	12.069295	1
GTCCTAA	415	0.0	11.945877	1
AGGACCT	610	0.0	11.865029	5
GGACCTG	555	0.0	11.839713	6
GTGTAGG	130	2.4592737E-9	11.733821	1
CTAAATT	510	0.0	11.7198305	19
GGACGTG	780	0.0	11.598826	6
AGGACGT	805	0.0	11.593517	5