SRR1926952_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926952_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	656271
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTAGGACGTGGAATATGGCAAGA	1611	0.24547785899422647	No Hit
GTCCTACAGTGGACATTTCTAAATT	1594	0.2428874656963358	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1426	0.21728828487012228	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1397	0.2128693786560735	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1153	0.17568961602752522	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1100	0.16761368398116022	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1019	0.15527122179709296	No Hit
GGTATCAACGCAGAGTACTTTTTTT	870	0.1325671864214631	No Hit
GTACATGGGAAGCAGTGGTATCAAC	857	0.13058629742895847	No Hit
CCCATGTACTCTGCGTTGATACCAC	717	0.10925364674044716	No Hit
TATCAACGCAGAGTACTTTTTTTTT	717	0.10925364674044716	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGTTAC	50	8.448922E-5	15.252607	1
CCAACGA	40	0.0053144083	14.23394	19
TGCTATA	65	5.280805E-5	13.196341	2
TAGGACC	395	0.0	13.015353	4
CTTAGCC	75	1.4397605E-5	12.6968975	3
GCACTAA	55	0.0029868695	12.132755	1
TCCAACG	55	0.0030911916	12.077283	18
AGGACCT	570	0.0	11.691829	5
GTCTAAA	60	0.0057204473	11.121693	1
GACAGTC	60	0.005922354	11.069999	7
GGACCTG	585	0.0	11.066551	6
TGTAGGA	1060	0.0	11.059197	2
CCTACAC	165	7.6397555E-11	10.965502	3
CTAAATT	495	0.0	10.927066	19
GTAGGAC	960	0.0	10.911397	3
GTTGTAG	70	0.001447079	10.894719	1
GTTCAGG	70	0.001447079	10.894719	1
GTCTTAG	105	3.3154483E-6	10.894718	1
GTAGCAC	70	0.0014600739	10.883056	3
CATTAGA	80	3.6460767E-4	10.724488	1