SRR1926949_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926949_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	616261
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	2335	0.37889790202527823	No Hit
CTGTAGGACGTGGAATATGGCAAGA	2204	0.357640674973753	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1846	0.29954840562683666	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1760	0.28559327947087354	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1728	0.28040067438958494	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1475	0.23934664046564685	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1381	0.2240933630393616	No Hit
GGTATCAACGCAGAGTACTTTTTTT	939	0.15237050535406266	No Hit
CTGAAGGACCTGGAATATGGCGAGA	932	0.15123462299253077	No Hit
TATCAACGCAGAGTACTTTTTTTTT	759	0.1231621017718142	No Hit
GTACATGGGAAGCAGTGGTATCAAC	643	0.104338908352143	No Hit
GAATATGGCAAGAAAACTGAAAATC	634	0.10287848817303058	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATTAG	40	0.0051797377	14.288908	1
TAGGACC	490	0.0	13.984769	4
GGACTAT	55	1.926953E-4	13.843509	6
CCAACGA	50	0.0015092283	13.28654	19
GGACCTG	790	0.0	12.288305	6
TCCAACG	85	3.9771858E-6	12.281674	18
CTGTAGG	1345	0.0	12.252694	1
TGTAGGA	1335	0.0	12.129421	2
GTCATAC	55	0.0030028576	12.123921	1
TCCTAGA	110	3.659443E-8	12.122934	2
GGTAGCA	55	0.0030046902	12.122934	2
CTAGACT	55	0.003023071	12.11307	4
CAAGACC	55	0.003023071	12.11307	4
CCGTGTG	55	0.0030862882	12.079652	9
ATCCCGT	55	0.0030862882	12.079652	10
AGGACCT	845	0.0	11.939002	5
GTCCTAG	80	2.781051E-5	11.907423	1
TAGCACT	80	2.8066652E-5	11.896766	4
GTAGGAC	1350	0.0	11.844855	3
CTCTTAC	65	7.830118E-4	11.724232	1