SRR1926947_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926947_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	708680
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	1764	0.24891347293559857	No Hit
GTCCTACAGTGGACATTTCTAAATT	1281	0.18075859344132753	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1193	0.16834114127673985	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1142	0.16114466331771743	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1137	0.16043912626291132	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	914	0.12897217361855845	No Hit
GTACATGGGAAGCAGTGGTATCAAC	912	0.128689958796636	No Hit
TATCAACGCAGAGTACTTTTTTTTT	899	0.1268555624541401	No Hit
CTGTAGGACCTGGAATATGGCGAGA	825	0.11641361404300954	No Hit
CTTTAGGACGTGAAATATGGCGAGG	779	0.10992267313879324	No Hit
CCCATGTACTCTGCGTTGATACCAC	738	0.10413726928938306	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGAACT	40	0.005318848	14.232372	19
TTATAAC	55	1.9176747E-4	13.85193	3
GTTTAGG	65	5.2612384E-5	13.20187	1
TAGGACC	465	0.0	12.902401	4
GTAGGAC	725	0.0	12.478676	3
TGTAGGA	795	0.0	12.47216	2
ATAGCAC	100	1.3931094E-7	12.38016	3
CCAACGA	55	0.0030941612	12.075953	19
GTATAAA	105	2.586312E-7	11.804846	1
CTAACCT	65	7.8515813E-4	11.720862	4
CTTATAC	65	7.8515813E-4	11.720862	3
TGGCGAG	580	0.0	11.614924	18
TTAAGAC	115	6.8137524E-8	11.593461	3
CTGTAGG	815	0.0	11.582007	1
GGCGAGA	370	0.0	11.539762	19
GTCCTAA	340	0.0	11.497706	1
CTAGGAC	150	1.6734703E-10	11.42784	3
GGTCTAC	85	5.1194445E-5	11.217275	1
CCTAATA	60	0.005716175	11.123008	2
GGCGAGG	215	0.0	11.032846	19