SRR1926944_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926944_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	809486
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTAGGACGTGGAATATGGCAAGA	2337	0.2887017193626573	No Hit
GTCCTACAGTGGACATTTCTAAATT	2223	0.27461870866203986	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1749	0.2160630325910516	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1700	0.21000980869341782	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1654	0.20432719034053706	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1554	0.19197367218210076	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1275	0.15750735652006334	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1032	0.12748830739506303	No Hit
GTACATGGGAAGCAGTGGTATCAAC	910	0.1124170152417707	No Hit
CTGAAGGACCTGGAATATGGCGAGA	901	0.11130519860751142	No Hit
TATCAACGCAGAGTACTTTTTTTTT	855	0.10562258025463073	No Hit
CCCATGTACTCTGCGTTGATACCAC	820	0.101298848899178	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	460	0.0	14.688668	4
AGGACCT	785	0.0	13.699057	5
GGACCTG	780	0.0	13.542857	6
TTAAGGC	60	4.0284664E-4	12.688803	3
GGTCTAC	95	1.0024487E-6	12.0343895	1
TGTAGGA	1270	0.0	12.001314	2
AATACTG	105	2.6526504E-7	11.782459	5
GTAGGAC	1245	0.0	11.77154	3
AAGGACC	390	0.0	11.712742	4
TAAACAG	115	6.885057E-8	11.585428	5
CTGTAGG	1250	0.0	11.585105	1
GTCCTAC	1320	0.0	11.548152	1
TATACTG	125	1.7793354E-8	11.419922	5
TCTAGGA	135	4.5129127E-9	11.290125	2
GTCCTAA	505	0.0	11.130817	1
CTCTAAG	120	1.2223063E-7	11.115096	1
GACCTGG	845	0.0	11.006325	7
GGCGAGG	475	0.0	10.991307	19
CCAATAC	70	0.0014685105	10.876117	3
CTTAGAC	105	3.387273E-6	10.876116	3