SRR1926936_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926936_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	737161
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1996	0.2707685295342537	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1983	0.2690050070473072	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1661	0.2253239116014005	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1639	0.2223394889311833	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1492	0.20239811927109547	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1442	0.19561534047514723	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1347	0.18272806076284556	No Hit
GTACATGGGAAGCAGTGGTATCAAC	941	0.12765189693974588	No Hit
GGTATCAACGCAGAGTACTTTTTTT	930	0.12615968560463725	No Hit
TATCAACGCAGAGTACTTTTTTTTT	858	0.11639248413847178	No Hit
CCCATGTACTCTGCGTTGATACCAC	826	0.11205150570906491	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGCGTGC	50	0.001510798	13.285279	8
CTAATAC	80	1.944658E-6	13.09245	3
TAGGACC	565	0.0	12.973939	4
ATAGGAC	120	7.1122486E-10	12.695709	3
AGGACGT	890	0.0	12.300914	5
GGACGTG	860	0.0	11.955146	6
TGTAGGA	1290	0.0	11.8943	2
GGCGAGG	400	0.0	11.861052	19
ATTTAGA	250	0.0	11.818272	1
TCCTAAA	545	0.0	11.716045	2
CTGTAGG	1305	0.0	11.612318	1
GTAGGAC	1230	0.0	11.611929	3
GTGTTAA	100	1.8511619E-6	11.437038	1
TTTAGAA	285	0.0	11.36938	2
GACGTGG	485	0.0	11.352101	7
GACGTGA	410	0.0	11.34494	7
TAGGACG	935	0.0	11.301625	4
GTCCTAA	515	0.0	11.288985	1
CAATACT	85	5.2020572E-5	11.199809	4
GTATTAA	120	1.2152123E-7	11.119342	1