SRR1926935_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926935_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	584043
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	1543	0.2641928762094572	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1087	0.18611643320782886	No Hit
GTCCTACAGTGGACATTTCTAAATT	1022	0.17498711567470204	No Hit
GGTATCAACGCAGAGTACTTTTTTT	987	0.1689944062337876	No Hit
GTCCTACAGTGTGCATTTCTCATTT	864	0.14793431305571678	No Hit
CACACACACACACACACACACACAC	827	0.14159916307532153	No Hit
TATCAACGCAGAGTACTTTTTTTTT	801	0.13714743606207078	No Hit
CTTTAGGACGTGAAATATGGCGAGG	706	0.12088151043673154	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	680	0.11642978342348081	No Hit
CTGTAGGACCTGGAATATGGCGAGA	638	0.10923853209438346	No Hit
GTGTGTGTGTGTGTGTGTGTGTGTG	631	0.10803999020620057	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATTAG	80	1.233766E-7	14.29631	1
GGTATCA	405	0.0	14.119813	1
GTCTAGG	50	0.001461406	13.343224	1
AAGGTGT	50	0.0014747226	13.327177	6
GCTAGAC	65	5.3292475E-5	13.18299	3
TAGAACC	65	5.333546E-5	13.181857	4
CCTCTAG	60	3.974879E-4	12.707831	1
TCTAGAC	105	1.9233994E-8	12.694732	3
TAGGACC	280	0.0	12.580304	4
GTACTGA	70	1.06809304E-4	12.239244	6
TGTAGGA	670	0.0	12.232606	2
TCACGTC	70	1.0993361E-4	12.201514	8
AGGACGT	500	0.0	12.185895	5
TTAGGCT	55	0.0030160449	12.116656	4
AGGACCT	460	0.0	12.003769	5
CTAGACT	80	2.7975806E-5	11.900288	4
GGACGTG	475	0.0	11.623704	6
GTAGGAC	615	0.0	11.611034	3
TAGGACG	525	0.0	11.605614	4
CTCGAAC	90	7.5396456E-6	11.596984	18