SRR1926934_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926934_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	667401
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTAGGACGTGGAATATGGCAAGA	1988	0.29787189410863935	No Hit
GTCCTACAGTGGACATTTCTAAATT	1941	0.2908296511392701	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1638	0.24542965923035776	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1493	0.2237035904950697	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1440	0.21576233778492993	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1313	0.19673329827195343	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1024	0.15343099575817237	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1001	0.14998479175188528	No Hit
TATCAACGCAGAGTACTTTTTTTTT	841	0.12601119866467086	No Hit
CTGAAGGACCTGGAATATGGCGAGA	809	0.12121648004722797	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGCTTAT	50	8.482362E-5	15.24562	1
AATCCCG	110	1.2732926E-11	14.6674	19
CTTATAC	65	3.295343E-6	14.644928	3
GATATAC	185	0.0	13.90648	1
TAGGACC	390	0.0	13.423509	4
GTCTAGA	80	1.928498E-6	13.101706	1
GTGCTAG	105	1.9043E-8	12.704684	1
TTATACT	60	4.020084E-4	12.691318	4
GTAGGAC	1000	0.0	11.994197	3
AAATCCC	135	3.7471182E-10	11.951215	18
TGTAGGA	1055	0.0	11.920137	2
GGCGAGG	360	0.0	11.863338	19
GTCCTAA	475	0.0	11.835417	1
CTGTAGG	1045	0.0	11.762471	1
GTCTTAC	65	7.813873E-4	11.727402	1
TAGGACT	90	7.283179E-6	11.633707	4
CTGCGTT	155	2.5465852E-11	11.632854	11
TATACAC	300	0.0	11.423044	3
GACGTGG	385	0.0	11.338654	7
AGGACGT	790	0.0	11.205308	5