SRR1926928_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926928_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	315027
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	881	0.2796585689480584	No Hit
CTGTAGGACGTGGAATATGGCAAGA	873	0.2771191040767934	No Hit
GTATCAACGCAGAGTACTTTTTTTT	834	0.2647392128293765	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	806	0.25585108577994903	No Hit
CTTTAGGACGTGAAATATGGCGAGG	737	0.2339482012652884	No Hit
GTCCTACAGTGTGCATTTCTCATTT	677	0.21490221473080087	No Hit
CTGTAGGACCTGGAATATGGCGAGA	515	0.16347805108768457	No Hit
GGTATCAACGCAGAGTACTTTTTTT	515	0.16347805108768457	No Hit
TATCAACGCAGAGTACTTTTTTTTT	456	0.14474949766210515	No Hit
CTGAAGGACCTGGAATATGGCGAGA	401	0.12729067667215826	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATACC	25	0.005949202	19.039827	4
GTCTAGG	45	3.4333618E-5	16.940485	1
TTCAATA	40	0.005166625	14.291256	2
CAGTAGT	40	0.0051940274	14.279871	4
CAGTACA	50	0.0014714975	13.327879	4
GGCGAGG	200	0.0	13.287659	19
GCTACAC	60	3.999127E-4	12.695241	3
CTAGAGT	60	4.0045095E-4	12.693219	4
ACAGTGC	75	1.49112075E-5	12.648887	8
ACTGTTC	90	5.4513293E-7	12.648887	8
TCCTAGA	100	1.3754106E-7	12.385754	2
GTATAGA	55	0.0029899636	12.127847	1
AGAGGTG	55	0.0030114704	12.116254	5
GTCCTAA	160	3.6379788E-12	11.911279	1
ACTGTGC	65	8.087038E-4	11.675895	8
ACTGTCC	65	8.087038E-4	11.675895	8
AGTACAG	90	7.236842E-6	11.63545	5
GACGTGG	270	0.0	11.600337	7
AGGACGT	485	0.0	11.580926	5
GTCCTAG	75	2.0061123E-4	11.434828	1