SRR1926922_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926922_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	636984
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	1584	0.24867186616932294	No Hit
GTCCTACAGTGGACATTTCTAAATT	1445	0.22685028195370682	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1407	0.2208846690026751	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1275	0.20016201348856485	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1233	0.19356844127952977	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1057	0.16593823392738277	No Hit
GGTATCAACGCAGAGTACTTTTTTT	989	0.155262926541326	No Hit
CTGTAGGACCTGGAATATGGCGAGA	846	0.13281338306770657	No Hit
TATCAACGCAGAGTACTTTTTTTTT	782	0.12276603493965313	No Hit
CTGAAGGACCTGGAATATGGCGAGA	643	0.10094445072403703	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCAACG	55	1.9770241E-4	13.801852	18
TAGGACC	380	0.0	12.778069	4
TTAGGGA	55	0.0030149424	12.117527	4
CAAAAGT	55	0.0030149424	12.117527	4
GACGAAA	55	0.0030922904	12.076621	19
TGTACTG	80	2.7964606E-5	11.901142	5
CTATACT	105	2.6336784E-7	11.787798	4
AATGCCG	65	8.091883E-4	11.678491	18
GTGTAGA	100	1.8520568E-6	11.435906	1
TATAGGA	125	1.7398634E-8	11.435906	2
GTATAAA	135	4.474714E-9	11.294723	1
CTACACT	135	4.5420165E-9	11.284046	4
GATATAG	60	0.0057333647	11.118242	1
TGACGAA	60	0.005921087	11.070236	18
TAAAGAG	105	3.3652377E-6	10.881044	5
TTGTACT	70	0.0014622244	10.881044	4
TGTAGGA	870	0.0	10.844394	2
GTCCTAC	780	0.0	10.751707	1
GGACGTG	645	0.0	10.627997	6
TGAACTG	90	9.284496E-5	10.578794	5