SRR1926915_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926915_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	578454
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	1442	0.24928516355665273	No Hit
GTACATGGGAAGCAGTGGTATCAAC	923	0.15956324962745524	No Hit
GGTATCAACGCAGAGTACTTTTTTT	873	0.15091951996182928	No Hit
CCCATGTACTCTGCGTTGATACCAC	813	0.14054704436307813	No Hit
GTCCTACAGTGGACATTTCTAAATT	759	0.1312118163242021	No Hit
TATCAACGCAGAGTACTTTTTTTTT	758	0.13103894173088956	No Hit
CTGTAGGACGTGGAATATGGCAAGA	753	0.13017456876432698	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	625	0.10804662082032453	No Hit
CTTTAGGACGTGAAATATGGCGAGG	604	0.10441625436076162	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCCTAT	40	2.6818554E-4	16.685595	1
TACACCC	40	0.0051896903	14.284561	5
ACCGTCT	40	0.0053256666	14.228994	8
TAGGACC	140	0.0	13.604344	4
GGACCAC	50	0.0014704607	13.332257	6
TTATACA	65	5.3186137E-5	13.185749	4
TTCTAGG	100	1.3698082E-7	12.395013	2
CCTGTCC	85	3.9966053E-6	12.275994	8
TAACACC	55	0.0030093205	12.1202345	4
CTTACAC	80	2.7890253E-5	11.903801	3
GTTCTAG	105	2.5833106E-7	11.804774	1
GTCCTAC	350	0.0	11.44155	1
CATGGAC	100	1.8672454E-6	11.4276495	3
GTATAGA	85	5.115973E-5	11.217206	1
TAATACT	85	5.1797564E-5	11.203577	4
CCTTGTA	60	0.005711254	11.123729	2
TCCAACG	60	0.0059214435	11.069865	18
TGTAGAA	320	0.0	11.02441	2
AGGACGT	390	0.0	10.988124	5
GTCTTAT	70	0.001444416	10.896714	1