SRR1926909_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926909_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	636494
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1571	0.24682086555411362	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1470	0.23095268769226418	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1405	0.2207404940187967	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1198	0.1882185849356003	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1179	0.18523348216950986	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1149	0.18052016201252485	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1027	0.16135266004078594	No Hit
GTACATGGGAAGCAGTGGTATCAAC	872	0.1370005058963635	No Hit
GGTATCAACGCAGAGTACTTTTTTT	855	0.134329624474072	No Hit
TATCAACGCAGAGTACTTTTTTTTT	805	0.12647409087909706	No Hit
CCCATGTACTCTGCGTTGATACCAC	751	0.11799011459652409	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGACCGT	50	8.5168016E-5	15.2381735	6
ATGTCGA	40	0.005316437	14.2330265	17
TGTCGAG	40	0.005316437	14.2330265	18
GACGAAA	40	0.005324758	14.229673	11
TAGGACC	355	0.0	13.95044	4
GTATTAG	50	0.0014576033	13.348142	1
CCCCAGT	50	0.0014576033	13.348142	1
GACGTGG	320	0.0	13.342415	7
GTAGGAC	810	0.0	13.168792	3
TGTAGGA	895	0.0	12.783534	2
CCTTACA	75	1.4215089E-5	12.712514	2
ATAGGAC	90	5.226648E-7	12.698478	3
CTGTAGG	870	0.0	12.602924	1
GGACGTG	725	0.0	12.479538	6
AGGACGT	740	0.0	12.226575	5
TAGGACG	760	0.0	12.155451	4
CTAAACT	55	0.0030079598	12.121274	4
AACTGCC	55	0.0030943227	12.075558	7
TAGGACT	95	1.0056083E-6	12.030137	4
TAGCACT	105	2.62311E-7	11.791444	4