SRR1926907_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926907_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	567868
Sequences flagged as poor quality	0
Sequence length	25
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	1243	0.21888889671543388	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1209	0.21290158980608168	No Hit
GTCCTACAGTGGACATTTCTAAATT	1195	0.21043622813752494	No Hit
CTTTAGGACGTGAAATATGGCGAGG	963	0.1695816633442983	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	891	0.1569026604774349	No Hit
GTCCTACAGTGTGCATTTCTCATTT	875	0.15408510428479857	No Hit
GGTATCAACGCAGAGTACTTTTTTT	776	0.13665147534286137	No Hit
GTACATGGGAAGCAGTGGTATCAAC	751	0.13224904379186714	No Hit
CTGTAGGACCTGGAATATGGCGAGA	729	0.1283749040269922	No Hit
CCCATGTACTCTGCGTTGATACCAC	721	0.12696612593067402	No Hit
TATCAACGCAGAGTACTTTTTTTTT	671	0.11816126282868554	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTAGAC	40	2.708804E-4	16.66366	3
CCTATAC	55	1.1012713E-5	15.581601	3
TAGGACC	345	0.0	14.3496	4
CCATATA	40	0.0051656277	14.294505	2
AGGCGTG	40	0.005306682	14.23659	7
GTATTAA	55	1.9027462E-4	13.86379	1
GAGTAAG	50	0.0014607621	13.343898	1
GTAGGAC	735	0.0	12.955226	3
TGTAGGA	755	0.0	12.87452	2
TAGGACA	215	0.0	12.841481	4
CTGTAGG	725	0.0	12.7522955	1
TAGGCCT	60	4.011603E-4	12.693878	4
AGGACCT	575	0.0	12.417925	5
GGACCTG	540	0.0	12.340179	6
TTATACT	85	3.837631E-6	12.320528	4
GTATTAG	55	0.0029895944	12.1308155	1
GTCCTAA	215	0.0	11.969608	1
TTTATAC	80	2.7916672E-5	11.902614	3
TAAGACT	65	7.8666926E-4	11.717425	4
ACAGGTC	65	8.08511E-4	11.679248	8