SRR1926904_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926904_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	538038
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1477	0.27451592638438177	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1444	0.26838253060192774	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1437	0.26708150725413443	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1207	0.22433359725521246	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1172	0.21782848051624606	No Hit
GGTATCAACGCAGAGTACTTTTTTT	932	0.17322196573476223	No Hit
GTCCTACAGTGTGCATTTCTCATTT	890	0.16541582564800256	No Hit
TATCAACGCAGAGTACTTTTTTTTT	787	0.14627219638761574	No Hit
CTGTAGGACCTGGAATATGGCGAGA	725	0.13474884673573242	No Hit
GTACATGGGAAGCAGTGGTATCAAC	706	0.13121749764886495	No Hit
CTGAAGGACCTGGAATATGGCGAGA	602	0.11188800791022196	No Hit
CCCATGTACTCTGCGTTGATACCAC	599	0.11133042647545341	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCAACGA	40	2.7805803E-4	16.606375	19
TAGGACC	320	0.0	14.875513	4
TCCAACG	80	1.3007775E-7	14.234036	18
ATAGGAC	55	1.9212326E-4	13.847751	3
AGGACCC	50	0.0014733888	13.32846	5
TAAGACT	100	9.71886E-9	13.32846	4
GACGTGG	410	0.0	12.731993	7
GTTTAGG	60	3.9892315E-4	12.702063	1
ACTACAC	60	4.011276E-4	12.693771	3
CTAAGAC	75	1.442264E-5	12.69377	3
AGGACCT	520	0.0	12.632743	5
GGACCTG	505	0.0	12.63093	6
CTGTAGG	845	0.0	12.514161	1
GTAGGAC	865	0.0	12.43696	3
GGACGTG	800	0.0	12.376427	6
TGTAGGA	920	0.0	12.322381	2
TCCTATA	55	0.0030005642	12.124697	2
CGTCAAG	55	0.00301528	12.116781	3
AGGACGT	825	0.0	12.001384	5
TAGGACG	825	0.0	12.001384	4