SRR1926902_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926902_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	646985
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	1552	0.23988191380016538	No Hit
GTCCTACAGTGGACATTTCTAAATT	1182	0.18269357094832184	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1046	0.16167299087304962	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	992	0.15332658407845623	No Hit
GGTATCAACGCAGAGTACTTTTTTT	949	0.14668037126053926	No Hit
CTTTAGGACGTGAAATATGGCGAGG	947	0.14637124508296173	No Hit
GTCCTACAGTGTGCATTTCTCATTT	877	0.1355518288677481	No Hit
TATCAACGCAGAGTACTTTTTTTTT	823	0.12720542207315472	No Hit
CTGTAGGACCTGGAATATGGCGAGA	684	0.10572115273151618	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACTCCG	45	6.8081473E-4	14.762446	7
CGAAATC	45	6.812139E-4	14.761306	13
TCCAACG	50	0.0015096582	13.286203	18
TTACACC	60	4.013278E-4	12.693755	4
GCACTGT	115	5.138645E-9	12.4168415	6
GTCCTAT	85	3.813826E-6	12.328057	1
CAATACT	55	0.0030164479	12.116767	4
ACGAAAT	55	0.0030908247	12.077432	12
TAGGACT	95	1.0102267E-6	12.025663	4
TAATTCT	80	2.7984177E-5	11.900394	4
GTCCTAC	525	0.0	11.794374	1
TCCTAGG	65	7.829064E-4	11.724586	2
TAGGACC	320	0.0	11.602885	4
GGCGAGG	255	0.0	11.537038	19
CATAAGC	75	2.0295582E-4	11.424379	3
AAACCAT	100	1.876575E-6	11.423494	6
CTAAGGT	60	0.0057767485	11.107036	4
ACAATAC	60	0.0057767485	11.107036	3
GTAAGAC	60	0.0057767485	11.107036	3
TGGCGAG	675	0.0	11.106983	18