SRR1926894_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926894_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	641821
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1878	0.29260494748535804	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1568	0.24430487628170472	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1488	0.2318403417775361	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1220	0.19008415118857128	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1214	0.18914931110075864	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1014	0.1579879748403371	No Hit
GTACATGGGAAGCAGTGGTATCAAC	938	0.1461466670613769	No Hit
CTGTAGGACCTGGAATATGGCGAGA	818	0.12744986530512403	No Hit
CCCATGTACTCTGCGTTGATACCAC	812	0.12651502521731137	No Hit
CTGAAGGACCTGGAATATGGCGAGA	660	0.10283240965939101	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAATTCC	40	2.711587E-4	16.661972	4
ATTAGGC	40	0.00514905	14.301833	3
TAGGACC	350	0.0	14.145675	4
TAGGGTG	50	0.0014773475	13.324364	5
GTATAAG	65	5.217964E-5	13.213081	1
TCCTAGA	105	1.8848368E-8	12.713737	2
TAATACT	85	3.8365833E-6	12.321459	4
ACCAGTC	70	1.07051674E-4	12.236661	7
TTCTAGG	55	0.0029810574	12.135839	2
GTCCTAG	120	9.322321E-9	11.928476	1
GTTCTAG	80	2.7316046E-5	11.928475	1
TTATAAC	80	2.755831E-5	11.918195	3
CTAGACA	80	2.7958895E-5	11.901408	4
GCAGAAC	75	2.0015125E-4	11.441466	3
AGGACCT	645	0.0	11.361861	5
GTCCTAC	980	0.0	11.295537	1
GGACCTG	620	0.0	11.205974	6
GTAGGAC	945	0.0	11.199319	3
TTAGGAC	435	0.0	11.178444	3
TTAGAAC	60	0.0057127182	11.123649	3