SRR1926889_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926889_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	618222
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1345	0.21755938805154135	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1127	0.18229697422608707	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1085	0.17550329816797203	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1005	0.16256296281918145	No Hit
GTACATGGGAAGCAGTGGTATCAAC	855	0.13829983404019916	No Hit
CTTTAGGACGTGAAATATGGCGAGG	842	0.13619702954602067	No Hit
GTATCAACGCAGAGTACTTTTTTTT	774	0.1251977444995487	No Hit
CCCATGTACTCTGCGTTGATACCAC	713	0.1153307387960959	No Hit
CTGTAGGACCTGGAATATGGCGAGA	703	0.11371319687749708	No Hit
GATATACACTGTTCTACAAATCCCG	626	0.10125812410428617	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGTCGTC	35	0.0021497982	16.306509	8
CCAACGA	80	7.878043E-9	15.408451	19
AGGACCG	45	6.652148E-4	14.807462	5
TCCAACG	125	7.2759576E-12	13.654258	18
GTACATA	85	2.5635018E-7	13.464946	1
TAGATAG	60	4.0172125E-4	12.69211	5
GTATTAA	100	1.364715E-7	12.398972	1
TAGGACC	300	0.0	12.379833	4
ATAGGAC	70	1.0549337E-4	12.255739	3
CCCCTAT	55	0.0029753046	12.138853	1
ACTGTTC	390	0.0	11.951139	8
TAGGACT	105	2.625875E-7	11.790318	4
TGAACTG	105	2.6397538E-7	11.785531	5
GTAGGAC	740	0.0	11.72208	3
ACTGGCC	65	7.926065E-4	11.707237	8
TGTAGGA	800	0.0	11.676996	2
GTTCTAT	90	7.1192735E-6	11.657152	1
GTATAGA	100	1.8337323E-6	11.445205	1
CTGTAGG	770	0.0	11.395658	1
GTCCTAT	85	5.1006664E-5	11.220788	1