SRR1926889_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926889_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	618222
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTAGGACGTGGAATATGGCAAGA	1438	0.23260252789451039	No Hit
GTCCTACAGTGGACATTTCTAAATT	1332	0.21545658355736289	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1297	0.20979518684226703	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1082	0.17501803559239237	No Hit
GTACATGGGAAGCAGTGGTATCAAC	1046	0.16919488468543664	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1035	0.1674155885749779	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1034	0.16725383438311806	No Hit
CTGTAGGACCTGGAATATGGCGAGA	871	0.14088790110995728	No Hit
CCCATGTACTCTGCGTTGATACCAC	820	0.13263843732510328	No Hit
GGTATCAACGCAGAGTACTTTTTTT	756	0.12228616904607084	No Hit
GATATACACTGTTCTACAAATCCCG	752	0.1216391522786313	No Hit
TATCAACGCAGAGTACTTTTTTTTT	713	0.1153307387960959	No Hit
GTGTATATCAATGAGTTACAATGAA	658	0.10643425824380238	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCAACGT	65	3.4029235E-6	14.599269	19
TGTAGGA	845	0.0	13.191627	2
TCCAACG	170	0.0	12.838769	18
TAGGACC	375	0.0	12.6948	4
GGCGAGG	275	0.0	12.422651	19
GTAGGAC	815	0.0	12.384276	3
GCCGGTT	70	1.10095425E-4	12.199831	11
CCGGTTT	70	1.10095425E-4	12.199831	12
TGCCGGT	70	1.10095425E-4	12.199831	10
TAGGACT	95	1.0089789E-6	12.026653	4
CTGTAGG	860	0.0	11.965469	1
CTACACT	120	9.638825E-9	11.901375	4
GTGTAGG	105	2.6076668E-7	11.796645	1
CCAACGA	105	2.7485112E-7	11.748936	19
CTAATGT	65	7.863634E-4	11.718277	4
GGACCTT	90	7.258517E-6	11.636901	6
ACTGTTC	270	0.0	11.598309	8
AGGACCT	520	0.0	11.535179	5
GCAGGAC	75	2.0261976E-4	11.426248	3
GTCCTAC	680	0.0	11.3496	1