SRR1926888_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926888_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	685852
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1620	0.2362025626520007	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1602	0.23357808973364516	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1470	0.21433195499903768	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1270	0.18517114479508698	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1212	0.17671450983594128	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1187	0.17306940856044745	No Hit
CTGTAGGACCTGGAATATGGCGAGA	991	0.14449181456057575	No Hit
GGTATCAACGCAGAGTACTTTTTTT	898	0.13093203781573867	No Hit
GTACATGGGAAGCAGTGGTATCAAC	810	0.11810128132600035	No Hit
TATCAACGCAGAGTACTTTTTTTTT	782	0.11401876789744725	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACTAA	90	5.129059E-7	12.718618	1
TAGGACC	400	0.0	12.37978	4
ACTATAC	135	3.5470293E-10	11.992686	3
TGTAGGA	935	0.0	11.936457	2
GACAGGT	80	2.899712E-5	11.859369	7
GTAAGAC	65	7.848227E-4	11.721359	3
TAGACTG	65	7.8530493E-4	11.720501	5
CTGTAGG	915	0.0	11.676109	1
AATCCCG	140	6.91216E-10	11.520531	19
TATTAGG	75	1.9933209E-4	11.446756	2
GTAGGAC	915	0.0	11.240975	3
CAGGACT	85	5.1837706E-5	11.20342	4
TGGCGAG	720	0.0	11.068745	18
AATGTCC	155	3.1832315E-10	11.016933	8
GGCGAGA	475	0.0	10.785785	19
GGCGAGG	265	0.0	10.7405615	19
GTTCTAA	80	3.6250817E-4	10.731334	1
GTCCTAA	400	0.0	10.731334	1
GTCCAAG	80	3.6250817E-4	10.731334	1
TTAGACT	80	3.6819858E-4	10.71327	4