SRR1926876_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926876_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	693640
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTAGGACGTGGAATATGGCAAGA	1813	0.26137477654114527	No Hit
GTCCTACAGTGGACATTTCTAAATT	1773	0.25560809641889165	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1337	0.1927512830863272	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1327	0.1913096130557638	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1326	0.19116544605270747	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1325	0.19102127904965113	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1091	0.15728620033446744	No Hit
GGTATCAACGCAGAGTACTTTTTTT	747	0.10769275128308634	No Hit
GTACATGGGAAGCAGTGGTATCAAC	730	0.10524191223112854	No Hit
GATATACACTGTTCTACAAATCCCG	722	0.10408857620667783	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCTAAG	65	3.2554908E-6	14.662295	1
TCCAACG	115	2.5465852E-11	14.026584	18
TAGGACC	465	0.0	13.927984	4
CTAATCT	50	0.001469533	13.333997	4
GACGTGA	500	0.0	12.713768	7
TGTAGGA	1065	0.0	12.707323	2
CCCTTAT	75	1.4279347E-5	12.707322	1
TAACCTG	60	3.9998392E-4	12.699045	5
GGACGTG	900	0.0	12.381569	6
CCAACGA	115	5.3969416E-9	12.376397	19
GTAGGAC	1030	0.0	12.299236	3
TTAGGAC	620	0.0	12.290288	3
AGGACGT	940	0.0	12.259982	5
ACCTAAT	55	0.002992777	12.129717	1
CTGTAGG	1085	0.0	12.121732	1
TAATGGA	95	1.0054991E-6	12.030675	4
TAGGACG	965	0.0	11.942366	4
GTCCTAA	425	0.0	11.885084	1
GTCCTAC	995	0.0	11.589844	1
AGGACCT	775	0.0	11.429141	5