SRR1926874_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926874_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	551630
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1445	0.2619509453800555	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1289	0.233671120134873	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1122	0.2033972046480431	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1066	0.1932454725087468	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1065	0.19306419157768792	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	989	0.17928684081721444	No Hit
CTGTAGGACCTGGAATATGGCGAGA	873	0.15825825281438644	No Hit
GGTATCAACGCAGAGTACTTTTTTT	719	0.13034098943132172	No Hit
GTACATGGGAAGCAGTGGTATCAAC	637	0.11547595308449504	No Hit
TATCAACGCAGAGTACTTTTTTTTT	593	0.10749959211790512	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	260	0.0	15.010596	4
ATTACAC	50	0.0014741115	13.327693	3
GGCGAGG	235	0.0	13.326995	19
GTGTAAT	65	5.2894953E-5	13.193232	1
TCCAACG	65	5.49171E-5	13.140602	18
CTAGACA	80	1.9487015E-6	13.088507	4
ATTAGAC	60	4.013512E-4	12.69304	3
GTCCTAA	335	0.0	12.514973	1
AGGACCT	555	0.0	12.17735	5
CCTACAC	110	3.6850906E-8	12.116084	3
TGATACT	55	0.0030188041	12.114982	4
AATCCCG	110	3.8469807E-8	12.078736	19
ACTGTTA	55	0.0030915302	12.076547	8
GTAGGAC	660	0.0	11.683367	3
CTAAAGT	345	0.0	11.5882435	4
TGTAGGA	720	0.0	11.381199	2
AAAGTGT	360	0.0	11.369815	6
GATATAC	235	0.0	11.353041	1
GTGTAGG	135	4.480171E-9	11.292972	1
GTCCTAG	120	1.2170312E-7	11.11652	1