SRR1926873_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926873_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	609674
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1622	0.26604382013994365	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1456	0.23881615420700245	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1312	0.2151969741205956	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1245	0.2042074944970591	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1176	0.1928899707056558	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1165	0.19108572778238864	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1008	0.16533426060484785	No Hit
GATATACACTGTTCTACAAATCCCG	761	0.12482080587330277	No Hit
GTACATGGGAAGCAGTGGTATCAAC	753	0.12350862920183575	No Hit
GGTATCAACGCAGAGTACTTTTTTT	731	0.11990014335530134	No Hit
CTGAAGGACCTGGAATATGGCGAGA	640	0.1049741337173637	No Hit
CCCATGTACTCTGCGTTGATACCAC	610	0.10005347119936228	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGACCTA	35	0.00212481	16.335016	6
CCAACGA	65	3.4109325E-6	14.595883	19
TAGGACC	380	0.0	14.293139	4
GCCGGTT	60	2.601717E-5	14.227484	11
CCGGTTT	60	2.6037304E-5	14.2263155	12
TCCAACG	95	4.976755E-9	13.980171	18
GAGTAAG	55	1.8915602E-4	13.873734	1
CAATACA	55	1.9075091E-4	13.860014	4
AAGAGGT	55	1.982124E-4	13.79748	7
GATATAC	285	0.0	13.721609	1
ACCCTAC	50	0.0014531005	13.353469	1
TCTTATG	50	0.0014558136	13.350165	2
TGCCGGT	65	5.5232245E-5	13.133061	10
CCTACAC	115	5.0622475E-9	12.428817	3
ACAGATC	100	1.4667239E-7	12.330486	8
ACAAGAC	55	0.0029961332	12.127512	3
CTGTAGG	930	0.0	12.102222	1
GGACGTG	700	0.0	11.9790125	6
GACGTGG	405	0.0	11.94504	7
TAAATAC	80	2.7725084E-5	11.91095	3