SRR1926866_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926866_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	621715
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1606	0.258317717925416	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1486	0.239016269512558	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1325	0.2131201595586402	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1315	0.21151170552423537	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1255	0.20186098131780636	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1175	0.18899334904256773	No Hit
CTGTAGGACCTGGAATATGGCGAGA	911	0.1465301625342802	No Hit
GGTATCAACGCAGAGTACTTTTTTT	835	0.13430591187280344	No Hit
GTACATGGGAAGCAGTGGTATCAAC	747	0.12015151637004093	No Hit
TATCAACGCAGAGTACTTTTTTTTT	742	0.11934728935283853	No Hit
CTGAAGGACCTGGAATATGGCGAGA	649	0.10438866683287358	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCAACG	60	2.5998756E-5	14.228647	18
CCAACGA	40	0.0053271195	14.228647	19
GGTAGGA	65	5.2583793E-5	13.202089	2
ATAGGAC	105	1.9028448E-8	12.704906	3
GTAGGAG	60	3.9832536E-4	12.704906	3
AAAGGCG	60	3.9859704E-4	12.70388	5
TAGGACC	390	0.0	12.21527	4
CCTCTAG	55	0.002981959	12.135254	1
AAGGCGT	55	0.0029982536	12.1264305	6
TAGGCTG	65	7.816692E-4	11.726659	5
TGTAGGA	990	0.0	11.5573845	2
CTGTAGG	975	0.0	11.441812	1
GTAGGAC	1000	0.0	11.243842	3
GGACCTG	535	0.0	11.219782	6
CCTTATA	95	1.30247645E-5	11.040344	2
GTCCTAG	95	1.30247645E-5	11.040344	1
GATATAC	190	0.0	11.040344	1
AGGACCT	555	0.0	10.98714	5
ACTGTTC	235	0.0	10.899415	8
GTGTTAG	70	0.0014444065	10.896963	1