SRR1926865_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926865_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	699548
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1689	0.24144161658671026	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1588	0.22700372240360916	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1431	0.20456065916849164	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1287	0.1839759387490208	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1229	0.17568487080228948	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1210	0.17296883130249818	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1061	0.15166936364624015	No Hit
GGTATCAACGCAGAGTACTTTTTTT	923	0.13194233991091392	No Hit
GTACATGGGAAGCAGTGGTATCAAC	787	0.11250121507030254	No Hit
TATCAACGCAGAGTACTTTTTTTTT	754	0.10778388330750714	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	405	0.0	14.105423	4
TAAGACT	85	2.6198722E-7	13.441639	4
TGTAGGA	910	0.0	12.777466	2
TAGACTG	120	7.1122486E-10	12.6948805	5
GATATAC	210	0.0	12.255558	1
GTAGGAC	955	0.0	12.163158	3
AGGACCT	655	0.0	12.064982	5
CTAGACT	80	2.7966405E-5	11.901451	4
ACTATAC	80	2.7966405E-5	11.901451	3
CTAAGAC	80	2.7966405E-5	11.901451	3
GGACCTG	665	0.0	11.883554	6
ACTGTTC	240	0.0	11.859766	8
CTGTAGG	970	0.0	11.79229	1
GGCGAGG	330	0.0	11.789574	19
CCCTTAT	65	7.7900547E-4	11.731815	1
CTAGAAC	130	2.5138434E-9	11.718351	3
GTAGACT	65	7.865494E-4	11.718351	4
TCTGTAC	65	7.865494E-4	11.718351	3
GACGTGG	365	0.0	11.698139	7
GTCCTAC	835	0.0	11.644003	1