SRR1926864_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926864_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	628694
Sequences flagged as poor quality	0
Sequence length	25
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	1275	0.20280136282515818	No Hit
GTCCTACAGTGGACATTTCTAAATT	1021	0.16240015015253842	No Hit
CTGTAGGACGTGGAATATGGCAAGA	988	0.15715117370294612	No Hit
GTCCTACAGTGTGCATTTCTCATTT	850	0.13520090855010544	No Hit
GGTATCAACGCAGAGTACTTTTTTT	792	0.1259754347902159	No Hit
CTGTAGGACCTGGAATATGGCGAGA	755	0.12009021877097603	No Hit
GTACATGGGAAGCAGTGGTATCAAC	720	0.11452312253655993	No Hit
CTTTAGGACGTGAAATATGGCGAGG	700	0.11134192468832213	No Hit
TATCAACGCAGAGTACTTTTTTTTT	685	0.10895602630214381	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	682	0.10847884662490814	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTCGAG	25	0.00605756	18.984007	18
CTAGGAC	90	2.215529E-9	14.806575	3
TAGGACC	280	0.0	13.937822	4
CTAATAC	55	1.9251594E-4	13.845109	3
GTGTAGA	170	0.0	12.887242	1
TAATACT	90	5.262027E-7	12.69135	4
ACTATAC	60	4.0194165E-4	12.69135	3
GTCCTAA	220	0.0	12.556148	1
TCTACAC	70	1.0692874E-4	12.238088	3
TTGCACA	95	1.0123895E-6	12.023384	4
CTTGCAC	80	2.8035543E-5	11.898141	3
TAGGACA	210	0.0	11.784825	4
AGGACCT	485	0.0	11.775479	5
CTGTAGG	595	0.0	11.526479	1
GTGTAAC	100	1.8626506E-6	11.430424	1
CTAGAAG	75	2.0329584E-4	11.422215	3
TAGGACT	100	1.8788269E-6	11.422215	4
GGCGAGA	435	0.0	11.346762	19
GGACCTG	505	0.0	11.119751	6
TAATAGG	60	0.005784593	11.104931	4