SRR1926863_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926863_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	640784
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1874	0.29245424355164923	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1691	0.2638954780394017	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1352	0.21099153536917278	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1337	0.20865065295013607	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1231	0.19210841718894353	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1209	0.1886751229743564	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1046	0.1632375340208245	No Hit
GGTATCAACGCAGAGTACTTTTTTT	730	0.11392294439311842	No Hit
CTGAAGGACCTGGAATATGGCGAGA	707	0.1103335913505955	No Hit
GTACATGGGAAGCAGTGGTATCAAC	653	0.10190641464206349	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGTTAA	45	3.4496472E-5	16.936316	1
GGTCTAC	45	6.612511E-4	14.819275	1
TAGGGGT	45	6.651904E-4	14.807674	4
CATAACT	45	6.651904E-4	14.807674	4
CCAACGA	65	3.3979595E-6	14.601516	19
GTAGGGG	40	0.005201647	14.279946	3
CCAACAA	40	0.0053161993	14.233145	14
TAGGACC	395	0.0	14.218581	4
TCCAACG	95	4.945832E-9	13.986714	18
GGACCTG	560	0.0	13.598884	6
AGGACCT	630	0.0	13.447786	5
CTAGGAC	85	2.62271E-7	13.43995	3
TCTACTC	50	0.0014743522	13.3279505	3
TATGACG	50	0.0015086238	13.287379	16
CTAACAC	65	5.3365315E-5	13.181489	3
GTAACTC	60	4.014438E-4	12.693285	3
GTAGGAC	950	0.0	12.626479	3
TGTAGGA	960	0.0	12.504743	2
GACTGTC	70	1.0994656E-4	12.201743	7
CTGTAGG	940	0.0	12.161715	1