FastQCFastQC Report
Thu 26 May 2016
SRR1926859_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1926859_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30719
Sequences flagged as poor quality0
Sequence length25
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTT1490.4850418307887626No Hit
GGTATCAACGCAGAGTACTTTTTTT1410.4589993163839969No Hit
TATCAACGCAGAGTACTTTTTTTTT880.2864676584524236No Hit
AAAAAAAAAAAAAAAAAAAAAAAAA710.2311273153422963No Hit
ACGCAGAGTACTTTTTTTTTTTTTT500.16276571502978612No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)