SRR1926846_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926846_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	264106
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	912	0.34531589589028644	No Hit
GGTATCAACGCAGAGTACTTTTTTT	678	0.2567151068131735	No Hit
TATCAACGCAGAGTACTTTTTTTTT	454	0.17190067624362945	No Hit
CTGTAGGACGTGGAATATGGCAAGA	431	0.1631920516762209	No Hit
GTCCTACAGTGGACATTTCTAAATT	429	0.16243477997470712	No Hit
GTCCTACAGTGTGCATTTCTCATTT	354	0.13403709116794016	No Hit
CTGTAGGACCTGGAATATGGCGAGA	318	0.120406200540692	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	303	0.1147266627793386	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	297	0.11245484767479724	No Hit
CTTTAGGACGTGAAATATGGCGAGG	288	0.1090471250179852	No Hit
GTGTGTGTGTGTGTGTGTGTGTGTG	278	0.10526076651041628	No Hit
CACACACACACACACACACACACAC	276	0.10450349480890249	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCATATA	35	0.002118032	16.33787	2
TTAGGCT	35	0.002142378	16.309958	4
TCCAACG	50	8.7429304E-5	15.185155	18
TAGGACC	120	4.9112714E-11	13.478368	4
GGTATCA	240	0.0	12.7072315	1
TAGGACA	90	5.2524956E-7	12.685523	4
GGCGAGG	130	1.9645086E-10	12.410944	19
GACGTGA	115	5.300535E-9	12.381546	7
AGGACGT	200	0.0	12.368385	5
GGACGTG	200	0.0	12.368385	6
ATGGCAA	200	0.0	12.337938	17
GGCAAGA	185	0.0	12.312288	19
CTAGGAC	55	0.0030186623	12.111207	3
CTGGACA	55	0.0030229606	12.108909	4
GTAGGAC	290	0.0	11.812901	3
TTAGGAC	130	2.5011104E-9	11.711937	3
GACATGG	90	7.4601903E-6	11.601968	7
TGTAGGA	310	0.0	11.375022	2
TATGGCA	210	0.0	11.298477	16
TTCCAAC	85	5.336795E-5	11.165555	17