SRR1926842_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926842_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	628544
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1427	0.22703263415130842	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1238	0.1969631402097546	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1212	0.19282659606964667	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	987	0.1570295794725588	No Hit
CTTTAGGACGTGAAATATGGCGAGG	976	0.15527950310559005	No Hit
GTCCTACAGTGTGCATTTCTCATTT	959	0.15257483962936566	No Hit
GGTATCAACGCAGAGTACTTTTTTT	784	0.12473271560940842	No Hit
CTGTAGGACCTGGAATATGGCGAGA	733	0.11661872518073516	No Hit
TATCAACGCAGAGTACTTTTTTTTT	689	0.1096184197128602	No Hit
GTACATGGGAAGCAGTGGTATCAAC	632	0.10054984217493126	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATTGA	35	0.0021212024	16.339287	1
TATGTCG	35	0.0021854464	16.266481	16
TAGGACC	300	0.0	15.235389	4
AGGACTC	40	0.005193698	14.283175	5
AGACTGT	105	1.9213985E-8	12.6961565	6
TGTAGGA	745	0.0	12.662652	2
CTGTAGG	700	0.0	12.526786	1
AGGACCT	490	0.0	12.437052	5
GGACGTG	600	0.0	12.378753	6
CCTACAC	100	1.3942008E-7	12.378752	3
GTAGGAC	750	0.0	12.315272	3
TAGCACT	70	1.0655118E-4	12.2427225	4
GGCCTAG	55	0.002990453	12.130683	1
CTAGGTT	55	0.003012009	12.11906	4
ACTGTTC	290	0.0	12.1054125	8
CGAAATC	55	0.0030940352	12.075669	13
GGCGAGG	260	0.0	12.043453	19
GTAGAAC	340	0.0	12.042677	3
GTATAGG	95	9.961586E-7	12.039474	1
TAGACTG	80	2.7927035E-5	11.902647	5