SRR1926827_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926827_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	740597
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	2109	0.28477025966888875	No Hit
GTCCTACAGTGGACATTTCTAAATT	1765	0.23832124623783243	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1642	0.22171302341219312	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1379	0.1862011323297286	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1307	0.17647924579764704	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1289	0.17404877416462666	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1265	0.17080814532059946	No Hit
TATCAACGCAGAGTACTTTTTTTTT	1097	0.14812374341240916	No Hit
CTGTAGGACCTGGAATATGGCGAGA	938	0.1266545773207291	No Hit
CACACACACACACACACACACACAC	759	0.10248488719235968	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	380	0.0	15.299038	1
TCTACAC	105	1.9324943E-8	12.691906	3
TTAATCA	60	4.021737E-4	12.691047	4
TGTAGGA	865	0.0	12.227466	2
CCAACGA	55	0.0030900987	12.078191	19
GTATTAT	95	9.978485E-7	12.038588	1
GTATAAG	135	3.5106495E-10	12.001431	1
TAGGACC	350	0.0	11.965844	4
CTGTAGG	840	0.0	11.7997265	1
TAGGACA	315	0.0	11.784544	4
GTCCTAA	455	0.0	11.729906	1
GTAGGAC	910	0.0	11.506398	3
GTGTAGG	100	1.8519404E-6	11.436659	1
GTCCATA	75	2.0101524E-4	11.436659	1
GGACATG	250	0.0	11.421169	6
GGACCTG	510	0.0	11.383845	6
GACGTGG	370	0.0	11.285414	7
GTCTTAA	120	1.2158125E-7	11.118974	1
GGTCTAC	120	1.2158125E-7	11.118974	1
TAACACT	130	3.162495E-8	10.982636	4