SRR1926818_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926818_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	772186
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1680	0.21756416200241913	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1496	0.1937357061640589	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1356	0.17560535933052399	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1242	0.16084207690893126	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1215	0.15734551001960667	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1023	0.13248103436218733	No Hit
GGTATCAACGCAGAGTACTTTTTTT	965	0.12496989067400859	No Hit
TATCAACGCAGAGTACTTTTTTTTT	922	0.11940128414656573	No Hit
CTGTAGGACCTGGAATATGGCGAGA	840	0.10878208100120956	No Hit
GTACATGGGAAGCAGTGGTATCAAC	786	0.10178894722256036	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCGAAC	50	8.843033E-5	15.171964	18
TCAATAC	45	6.593886E-4	14.825429	3
TAGGACT	135	1.8189894E-12	13.401269	4
GTATAAG	100	9.433279E-9	13.359414	1
TAGGACC	400	0.0	13.330735	4
CTAGGAC	95	7.0638634E-8	13.041919	3
CCTAAGC	60	3.978309E-4	12.707512	3
CCTAAAC	80	2.7691804E-5	11.913292	3
CTACACT	175	1.8189894E-12	11.426345	4
TCGAACT	75	2.1070556E-4	11.378972	19
TGTAGAA	270	0.0	11.295566	2
GTAGGAC	905	0.0	11.268263	3
TGGACTG	85	5.2116982E-5	11.197928	5
CCTACAC	120	1.2159398E-7	11.119073	3
CTAAGGT	60	0.005771065	11.108947	4
CAAGGGT	60	0.005771065	11.108947	4
TAGGTTG	60	0.005787857	11.104612	5
TGTAGGA	945	0.0	10.993006	2
GTCCTAT	140	7.756171E-9	10.905643	1
GTCTAGC	70	0.0014355215	10.905643	1