SRR1926813_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926813_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	819430
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1906	0.2326007102498078	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1766	0.21551566332694677	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1664	0.20306798628314804	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1517	0.18512868701414398	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1490	0.1818337136790208	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1137	0.13875498822352123	No Hit
GGTATCAACGCAGAGTACTTTTTTT	983	0.1199614366083741	No Hit
TATCAACGCAGAGTACTTTTTTTTT	941	0.11483592253151581	No Hit
CTGTAGGACCTGGAATATGGCGAGA	873	0.10653747116898332	No Hit
CTGAAGGACCTGGAATATGGCGAGA	854	0.10421878622945217	No Hit
GTACATGGGAAGCAGTGGTATCAAC	821	0.10019159659763494	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	440	0.0	15.784607	4
CCAACGA	60	2.5874293E-5	14.237047	19
GTAGGAC	1020	0.0	13.061641	3
TGTAGGA	1130	0.0	12.814069	2
CTGTAGG	1135	0.0	12.679124	1
TCCAACG	75	1.4904337E-5	12.655152	18
GTCTAGT	70	1.0577233E-4	12.253287	1
GGACCTA	70	1.0754078E-4	12.231549	6
AGGACCT	790	0.0	12.043051	5
TGGCGAG	1055	0.0	11.965417	18
GGACCTG	700	0.0	11.823831	6
GTCCTAA	485	0.0	11.790105	1
GGACGTG	940	0.0	11.739975	6
AGGACGT	950	0.0	11.717255	5
GGCGAGA	680	0.0	11.305889	19
GACGTGG	480	0.0	11.27237	7
TCTAGTA	85	5.168139E-5	11.20735	2
TAGGACG	995	0.0	11.187327	4
TAAGTAG	60	0.005807568	11.099678	5
GACGTGA	505	0.0	11.090274	7